Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807748.1_cds_XP_016494975.1_9338
CDS Infomation

[gene=LOC107814147] [db_xref=GeneID:107814147] [protein=transcription factor EMB1444-like isoform X2] [protein_id=XP_016494975.1] [location=join(8109..8197,8744..8947,10191..10284,10827..10868,10968..11027,11321..12553,12637..12738,13030..13176,13325..13450,13617..13706)] [gbkey=CDS]
Sequence

ATGAGAGCAGCTTCCTTGAGGCATTTCCTGCAAAGTCTCTGCTCCAAACCTCCATGGAAC
TATGCAGTGTTCTGGAAGCTTCAGCACGAGATTTTGACATGGGAAGATGGATATCTGGAC
ATTCCTTGTGCTAGAGAACCTTACAGAAGTTTAATAGGCAATTATTACAACAAAACCTTG
AATGAGTTATTTCCAAACTGTGGATCAAGATCACATAATGGAAAATTGGGTGAACATCCA
ATTGGCTTAGCCTTGGTTGAGATGTCAAGTACTTATCACGTTGCAGGAAAAGGGGTGGTT
GGTGAAGTGGCATCTTTGTGCATCCCACGCTGGATTTCTTCCGACAGTATAGCACCTGCA
GAGCTCAGCTTTGGTTCTGTTTCTGAGTGTCCAGATGAGTGGCTGCTTCAGTTTGTTGCT
GGCATTAAGACTATATTGCTGGTACCTTGTATTCCTCACGGTGTTCTGCAACTAGGTTCA
ATGGAAACGGTAGCTGAAAACGCGGAGATGGTTACCAATCTAGCTGAAGAACTTGATGCC
CATTTCAAATTTGTTGAGAACTTTTTACCTGGTGGAGGAAACTGTGAATTTCTTCTACAG
TCTACTCTCTCAGAGAGTTTGAATATACTATCTGCAACTACCACAAATAAGGTTAATGAA
GATGATTTAGCTGCTGATATAGCAATTCTGAAAGATCACAAGTTATCAACTGCATTTCCG
ATGACTTCATTAATTGAGGTTCAACATCCCTTTCAATTATCTGGACAAAACATGCAAAAT
GTCCTCGAGAATGCCAATGAAAGCAAAATTGGTAAGTTCGATGAAAACGTGCCAAATGTC
CTAGAAAATGCAAATGAAAGCAAAATTGAAATGCAACATGCAGACATGATTAATCTAGTG
ATGCAGCTCAATCATGAATATTCTGATGATAATAAATCAGGGATAACAGAAAGCAGCTTG
GATAGATCTTCTTGCCATGCAAAAGATGTAGATACCTTTTCTTACTCTAGCTGCAATGTT
GTCGGTGGAGTTAATGTTTCCAATGAGGTAGATTTTTACTTTGACGGAGACGTGCTAGAT
CCACAATCTCTTGGAATGGATTGCAGTGACACTATTCTTGGAAACCCAACAGAATGCGAA
CTTTACAAAGCCCTTGGAAGTACAATTCACAACTTGTCTGGCTTTAGCGAGAATACTGCT
AGCAAATCCACCTATACTGCTGATCCTATGTTTAATATTGAGCCATCTTTTGGGGAATCT
AATGGATGGCTTCTGAAAGAAGATAATGCAGAGAATCTTCTGGAAGCTGTAGTTGCCAGT
TCACTCAACAAAATGACTTGTCTGGAATCGCTAAACATGCCATTAGGAAAACATGTTCCT
TTCTCCAAAAGGGAAAATCAATCTACAGAAAGTGCTTTGGTTGGAGACAACACAGTTACA
TGGAGAACTCTTACATCAGCTTCTGCTGGGGCAGATAGATATGCTTTGACTAACTGTTCG
CCTTCTGCTTCTTCATTTGGTTGTGTTGTCAATGCATTTAATGAGGGGCAGCATCAGTCG
AAGGTCTTTAGCTCTCTGAGTTGTCGTAAGGAGTCAAAAATATCTAATAACAACAAGAAA
AGGGGGCGGTCTGGTGATAGTCATAGACCCAGACCACGAGATAGGCAGTTAATTCAGGAT
CGGCTTAAGGAGTTGCGACAACTTGTCCCTAATGGCGCCAAATGTAGCATTGATGGTTTA
CTGCATAAAACCATAAAGCACATGCTGTTTCTGCGAAGTGTTACTGATCAGGCTGATAAA
CTAAGGTGCCAGGCTCAGAAGGATGTAGCCCCAGACAAGAGCCTCCAATCACCTGAATTA
AAAACTAGTGATCAACGAGGCACAAGTTGGGCTCTAGAATTGGGAAGTGAGGACCAGATA
TGCCCTATAATTGTCAAAGATTTGGAGTACCCTGGACACATGCTTATAGAGATGATGTGT
GACGACCATGGACGCTTCTTAGAAATCGCTGATGTTATTCACCGTTTGGAGCTGACGATT
TTGAAGGGTGTGATGGAAAAGCGTCCAGAGAGCACCTGGGCTCACTTCATCGTTGAGGCC
TCAGGAAGCTGCCATAGACTGGATATCTTCTGGCCGCTGATGCAGCTCTTACAGCAGGTT
CCAACTTCTATTTCGCACAACATGTAG

Peptide Sequence

PEP ID

XP_016494975.1
PEP Infomation

PREDICTED: transcription factor EMB1444-like isoform X2 [Nicotiana tabacum]
Sequence

MRAASLRHFLQSLCSKPPWNYAVFWKLQHEILTWEDGYLDIPCAREPYRSLIGNYYNKTL
NELFPNCGSRSHNGKLGEHPIGLALVEMSSTYHVAGKGVVGEVASLCIPRWISSDSIAPA
ELSFGSVSECPDEWLLQFVAGIKTILLVPCIPHGVLQLGSMETVAENAEMVTNLAEELDA
HFKFVENFLPGGGNCEFLLQSTLSESLNILSATTTNKVNEDDLAADIAILKDHKLSTAFP
MTSLIEVQHPFQLSGQNMQNVLENANESKIGKFDENVPNVLENANESKIEMQHADMINLV
MQLNHEYSDDNKSGITESSLDRSSCHAKDVDTFSYSSCNVVGGVNVSNEVDFYFDGDVLD
PQSLGMDCSDTILGNPTECELYKALGSTIHNLSGFSENTASKSTYTADPMFNIEPSFGES
NGWLLKEDNAENLLEAVVASSLNKMTCLESLNMPLGKHVPFSKRENQSTESALVGDNTVT
WRTLTSASAGADRYALTNCSPSASSFGCVVNAFNEGQHQSKVFSSLSCRKESKISNNNKK
RGRSGDSHRPRPRDRQLIQDRLKELRQLVPNGAKCSIDGLLHKTIKHMLFLRSVTDQADK
LRCQAQKDVAPDKSLQSPELKTSDQRGTSWALELGSEDQICPIIVKDLEYPGHMLIEMMC
DDHGRFLEIADVIHRLELTILKGVMEKRPESTWAHFIVEASGSCHRLDIFWPLMQLLQQV
PTSISHNM

Transcript Sequence

Gene sequence data has not been registered.